Package index • MorphoGAM

All functions

CurveFinder(): CurveFinder: Automatically estimate curve in two-dimensional ST data

CurveFinderInteractive(): Interactively sketch and smooth a curve through 2D points

MorphoGAM(): MorphoGAM: Apply a GAM to the morphologically relevant coordinates

get_mapper_graph(): Mapper Algorithm

hello(): Hello, World!

is_loop(): Determines if a k-nearest neighbors graph of a dataset forms a loop.

plotFPCloading(): Plot top gene loadings from SVD Analysis

plotGAMestimates(): Plot depth-normalized counts with fitted GAM overlay